MIRA installation script

#! /bin/bash
#******************************************************************************
# Install script for MIRA, inspired from the AMBER DRS installation scripts
#
# (c) 2010 F. Millour
#
# $Log: not supported by cvs2svn $
# $Log: installMira.sh,v $
# Revision 1.2 2010/07/27 14:45:29 fmillour
# Add yorickinstallation to the MIRA installation script
# + change to MIRA 0.9.10
#
# Latest versions of the different software needed
####################################################
download_URL=https://cral.univ-lyon1.fr/labo/perso/eric.thiebaut/downloads/
yeti_version=6.3.3
MIRA_version=0.9.10
OptimPack_version=1.3.2
####################################################
yorick_URL=http://downloads.sourceforge.net/project/yorick/yorick
yorick_version=2.1.06
yorick_minus_version=2.1-06
yorick_short_version=2.1
####################################################
 
 
 
# Get root directory
currDir=$PWD
 
# Set log file
logFile=$PWD/mira-install.log
rm -f $logFile
touch $logFile
if [ $? != 0 ]
then
echo "ERROR - could not access log file $logFile"
exit 1
fi
 
# Print usage
function printUsage () {
echo -e "Usage: `basename $0` [-h] [-y] [-C <dir>] [-F <dir>]";
echo -e "\t-h\tprint this help.";
exit 0;
}
 
# Parse command-line parameters
installOpts=""
while getopts "hyC:F:" option
do
case $option in
h ) # Help option
printUsage;
exit 0;;
y ) # Assume yes option
installOpts="$installOpts -$option";;
* ) # Unknown option
echo "Invalid option -- $option"
printUsage;
exit 1;;
esac
done
 
# test first if yorick is installed
echo -e "Checking for the yorick software..." ;
if test `which yorick`;
then
echo "write, Y_SITE; quit;" > /tmp/getY_site.i
INSTALL_DIR=`yorick -batch /tmp/getY_site.i`;
echo -e "yorick found! installation directory is ${INSTALL_DIR}" ;
else
echo -e "yorick not found! checking if INSTALL_DIR has been set..." ;
# Then test if the INSTALL_DIR directory is set by the user
if test ${INSTALL_DIR} ;
then
echo -e "Installation directory is ${INSTALL_DIR}" ;
# If INSTALL_DIR directory is set by the user but do not exist, create it
if test ! -d ${INSTALL_DIR} ;
then
echo " Creating ${INSTALL_DIR} ..."
mkdir ${INSTALL_DIR}
fi
# Download yorick
cd ${INSTALL_DIR}
echo -e "Downloading yorick, version $yorick_version at ${yorick_URL}/${yorick_version}/yorick-${yorick_version}.tgz..."
curl -L -O ${yorick_URL}/${yorick_version}/yorick-${yorick_version}.tgz >> $logFile 2>&1
if [ $? != 0 ]
then
echo -e "\nERROR - See log file '$logFile' for details."
exit 1;
fi
# Uncompress yorick
echo -e "Uncompressing the yorick package..."
gunzip yorick-${yorick_version}.tgz >> $logFile 2>&1
if [ $? != 0 ]
then
echo -e "\nERROR - See log file '$logFile' for details."
exit 1;
fi
tar xf yorick-${yorick_version}.tar >> $logFile 2>&1
if [ $? != 0 ]
then
echo -e "\nERROR - See log file '$logFile' for details."
exit 1;
fi
rm -f yorick-${yorick_version}.tar >> $logFile 2>&1
if [ $? != 0 ]
then
echo -e "\nERROR - See log file '$logFile' for details."
exit 1;
fi
# Compile yorick
echo -e "Configuring yorick..."
cd yorick-${yorick_short_version}
./configure >> $logFile 2>&1
if [ $? != 0 ]
then
echo -e "\nERROR - See log file '$logFile' for details."
exit 1;
fi
echo -e "Compiling yorick..."
make relocatable >> $logFile 2>&1
if [ $? != 0 ]
then
echo -e "\nERROR - See log file '$logFile' for details."
exit 1;
fi
# Install yorick
echo -e "Installing yorick to ${INSTALL_DIR}..."
mv yorick-${yorick_minus_version}.tgz ${INSTALL_DIR}
cd ${INSTALL_DIR}
tar xzf yorick-${yorick_minus_version}.tgz
export PATH=${INSTALL_DIR}/yorick-${yorick_minus_version}/bin:${PATH}
export LD_LIBRARY_PATH=${INSTALL_DIR}/yorick-${yorick_minus_version}/lib:${LD_LIBRARY_PATH}
echo -e "Done!\n"
 
# test if yorick is installed
echo -e "Checking yorick installed well..." ;
if test `which yorick`;
then
echo "write, Y_SITE; quit;" > /tmp/getY_site.i
INSTALL_DIR=`yorick -batch /tmp/getY_site.i`;
echo -e "yorick found! installation directory is ${INSTALL_DIR}. Please consider adding this path to your PATH variable in your .bashrc or .profile file:\nexport PATH=${INSTALL_DIR}bin/:\$PATH" ;
echo "Press <enter> key when you have understood the above message..."
read touche
case $touche in
*) echo "Continuing..."
;;
esac
else
echo -e "ERROR - yorick not found!"
exit ;
fi
 
else
echo -e "ERROR - INSTALL_DIR variable, defining the installation directory, is not set !\nTry setting it with the following commands:\nbash shell:\nexport INSTALL_DIR=<your installation directory>\ntcsh shell:\nsetenv INSTALL_DIR <replace with your installation directory>"
exit ;
fi
fi
 
 
 
# Get kernel-name and hardware-platform
kernel=`uname -s`
if [ "$kernel" == "Darwin" ];
then
platform=`uname -p`
else
platform=`uname -m`
fi
 
echo -e "Installing the MIRA software on $kernel/$platform...\n"
 
 
 
 
 
####################################################
echo -e "Downloading yeti, version $yeti_version at ${download_URL}yeti-${yeti_version}.tar.bz2..."
curl -O ${download_URL}yorick/yeti-${yeti_version}.tar.bz2 >> $logFile 2>&1
if [ $? != 0 ]
then
echo -e "\nERROR - See log file '$logFile' for details."
exit 1;
fi
 
####################################################
echo -e "Uncompressing yeti..."
bunzip2 -k yeti-${yeti_version}.tar.bz2 >> $logFile 2>&1
if [ $? != 0 ]
then
echo -e "\nERROR - See log file '$logFile' for details."
exit 1;
fi
tar xf yeti-${yeti_version}.tar >> $logFile 2>&1
if [ $? != 0 ]
then
echo -e "\nERROR - See log file '$logFile' for details."
exit 1;
fi
rm -f yeti-${yeti_version}.tar >> $logFile 2>&1
if [ $? != 0 ]
then
echo -e "\nERROR - See log file '$logFile' for details."
exit 1;
fi
 
####################################################
echo -e "Installing yeti..."
cd yeti-${yeti_version}
yorick -batch ./config.i --with-regex \
--with-fftw --with-fftw-defs="-I/usr/local/include" \
--with-fftw-libs="-L/usr/local/lib -lrfftw -lfftw" \
--with-gsl --with-gsl-defs="-I/usr/local/include" \
--with-gsl-libs="-L/usr/local/lib -lgsl -lgslcblas"
# Tiff library not always installed on target machines
# --with-tiff --with-tiff-libs="-ltiff" >> $logFile 2>&1
if [ $? != 0 ]
then
echo -e "\nERROR - See log file '$logFile' for details."
exit 1;
fi
make clean >> $logFile 2>&1
if [ $? != 0 ]
then
echo -e "\nERROR - See log file '$logFile' for details."
exit 1;
fi
make >> $logFile 2>&1
if [ $? != 0 ]
then
echo -e "\nERROR - See log file '$logFile' for details."
exit 1;
fi
make install >> $logFile 2>&1
if [ $? != 0 ]
then
echo -e "\nERROR - See log file '$logFile' for details."
exit 1;
fi
echo -e "\nDone..."
cd ..
 
####################################################
echo -e "Downloading OptimPack, version $OptimPack_version at ${download_URL}OptimPack-${OptimPack_version}.tar.bz2..."
curl -O ${download_URL}OptimPack-${OptimPack_version}.tar.bz2 >> $logFile 2>&1
if [ $? != 0 ]
then
echo -e "\nERROR - See log file '$logFile' for details."
exit 1;
fi
 
####################################################
echo -e "Uncompressing OptimPack..."
bunzip2 -k OptimPack-${OptimPack_version}.tar.bz2 >> $logFile 2>&1
if [ $? != 0 ]
then
echo -e "\nERROR - See log file '$logFile' for details."
exit 1;
fi
tar xf OptimPack-${OptimPack_version}.tar >> $logFile 2>&1
if [ $? != 0 ]
then
echo -e "\nERROR - See log file '$logFile' for details."
exit 1;
fi
rm -f OptimPack-${OptimPack_version}.tar >> $logFile 2>&1
if [ $? != 0 ]
then
echo -e "\nERROR - See log file '$logFile' for details."
exit 1;
fi
 
####################################################
echo -e "Installing OptimPack..."
cd OptimPack-${OptimPack_version}/yorick
yorick -batch make.i >> $logFile 2>&1
if [ $? != 0 ]
then
echo -e "\nERROR - See log file '$logFile' for details."
exit 1;
fi
make >> $logFile 2>&1
if [ $? != 0 ]
then
echo -e "\nERROR - See log file '$logFile' for details."
exit 1;
fi
make install >> $logFile 2>&1
if [ $? != 0 ]
then
echo -e "\nERROR - See log file '$logFile' for details."
exit 1;
fi
cd ../..
echo -e "Done!\n"
 
####################################################
echo -e "Downloading MIRA, version $MIRA_version at ${download_URL}mira-${MIRA_version}.tar.bz2 into ${PWD}..."
curl -O ${download_URL}mira/mira-${MIRA_version}.tar.bz2 >> $logFile 2>&1
if [ $? != 0 ]
then
echo -e "\nERROR - See log file '$logFile' for details."
exit 1;
fi
 
####################################################
echo -e "Uncompressing MIRA..."
echo $PWD
bunzip2 -k mira-${MIRA_version}.tar.bz2 >> $logFile 2>&1
tar xf mira-${MIRA_version}.tar >> $logFile 2>&1
rm -f mira-${MIRA_version}.tar >> $logFile 2>&1
echo -e "Moving MIRA files into yorick directory..."
mv -f -v mira-${MIRA_version}/*.i ${INSTALL_DIR}/i
echo -e "Done!\n"